pcr/papis: added, plus dependencies

10 files changed, 270 insertions, 2 deletions

diff --git a/pcr/arxiv2bib/PKGBUILD b/pcr/arxiv2bib/PKGBUILD
new file mode 100644
index 000000000..f3bed848d
--- /dev/null
+++ b/pcr/arxiv2bib/PKGBUILD
@@ -0,0 +1,17 @@
+
+pkgname=arxiv2bib
+pkgver=1.0.8
+pkgrel=1
+pkgdesc="Get arXiv.org metadata in BibTeX format"
+arch=('any')
+url="https://pypi.python.org/pypi/$pkgname"
+license=('BSD3')
+makedepends=('python-setuptools' 'python2-setuptools')
+source=("https://pypi.python.org/packages/61/7d/3ddaa77d551915ac2ce484ee3d692005da556c9d51a7f492ff6749b3b0bd/$pkgname-$pkgver.tar.gz")
+sha256sums=('137608ed8aa4da6594350152964b9b0f46c6efcb07f8a4dfd50309c968b647a8')
+
+package(){
+  depends=(python)
+  cd "$srcdir"/$pkgname-$pkgver
+  python setup.py install --root="$pkgdir"
+}
diff --git a/pcr/cinclude2dot/.gitignore b/pcr/cinclude2dot/.gitignore
deleted file mode 100644
index f326e85cb..000000000
--- a/pcr/cinclude2dot/.gitignore
+++ /dev/null
@@ -1,2 +0,0 @@
-cinclude2dot
-cinclude2dot.1
diff --git a/pcr/papis/PKGBUILD b/pcr/papis/PKGBUILD
new file mode 100644
index 000000000..1503d0271
--- /dev/null
+++ b/pcr/papis/PKGBUILD
@@ -0,0 +1,38 @@
+pkgname="papis"
+pkgver=0.5.3
+pkgrel=1
+pkgdesc="Powerful and highly extensible command-line based document and bibliography manager."
+arch=(any)
+url="https://github.com/papis/papis"
+license=('GPLv3')
+depends=("python-setuptools"
+         "python-papis_python_rofi"
+         "python-requests"
+         "python-argcomplete"
+         "python-pyparsing"
+         "arxiv2bib"
+         "python-yaml"
+         "python-chardet"
+         "python-beautifulsoup4"
+         "python-vobject"
+         "python-prompt_toolkit"
+         "python-bibtexparser"
+         "python-unidecode"
+         "python-pyparser"
+         "python-pypi-magic"
+         "python-pylibgen"
+         "python-urwid"
+         "python-habanero")
+source=($pkgname-$pkgver.tar.gz::https://github.com/papis/papis/archive/v$pkgver.tar.gz)
+sha256sums=('7463ac387b50b77ca122b2febdb21f8f7c689395f13242542ba510957dc358b7')
+
+build () {
+	cd "$srcdir/$pkgname-$pkgver"
+  sed -i "s/.*configparser/#&/" setup.py
+	python setup.py build
+}
+
+package() {
+	cd "$srcdir/$pkgname-$pkgver"
+	python setup.py install --root="$pkgdir/" --prefix="/usr"
+}
diff --git a/pcr/python-bibtexparser/PKGBUILD b/pcr/python-bibtexparser/PKGBUILD
new file mode 100644
index 000000000..24cf68600
--- /dev/null
+++ b/pcr/python-bibtexparser/PKGBUILD
@@ -0,0 +1,22 @@
+
+_pkgname=bibtexparser
+pkgname=(python-$_pkgname python2-$_pkgname)
+pkgver=1.0.1
+pkgrel=1
+pkgdesc="Bibtex parser in Python"
+arch=('any')
+url="https://pypi.python.org/pypi/$_pkgname"
+license=('LGPL3')
+makedepends=('python-setuptools' 'python2-setuptools')
+source=(https://pypi.python.org/packages/35/71/209bae42db6cc230ffd126dbda7ec057dd69a084acb4ddcd9ab4544c4506/$_pkgname-$pkgver.tar.gz)
+sha256sums=('cc41cdd8332c2bf44b97daf1f135f4f267c3b744c33976655cd270b66f964c0a')
+
+_package(){
+  depends=($1 $1-future $1-pyparsing)
+  cd "$srcdir"/$_pkgname-$pkgver
+  $1 setup.py install --root="$pkgdir"
+}
+
+for pkg in "${pkgname[@]}"; do
+  eval "package_$pkg () { _package ${pkg%%-*}; }"
+done
diff --git a/pcr/python-habanero/Changelog.rst b/pcr/python-habanero/Changelog.rst
new file mode 100644
index 000000000..7724857a9
--- /dev/null
+++ b/pcr/python-habanero/Changelog.rst
@@ -0,0 +1,75 @@
+Changelog
+=========
+
+0.6.0 (2017-10-20)
+--------------------
+* Added verification and docs for additional Crossref search filters (#62)
+* Big improvement to docs on readthedocs (#59)
+* Added `mailto` support (#68) (#63) and related added docs about polite pool (#66)
+* Added support for `select` parameter (#65)
+* Added all new `/works` route filters, and simplified filter option handling within library (#60)
+
+0.5.0 (2017-07-20)
+--------------------
+* Now using `vcrpy` to mock all unit tests (#54)
+* Can now set your own base URL for content negotation (#37)
+* Some field queries with `works()` were failing, but now seem to be working, likely due to fixes in Crossref API (#53)
+* style input to `content_negotiation` was fixed (#57) (#58) thanks @talbertc-usgs
+* Fix to `content_negotiation` when inputting a DOI as a unicode string (#56)
+
+0.3.0 (2017-05-21)
+--------------------
+* Added more documentation for field queries, describing available fields that support field queries, and how to do field queries (#50)
+* `sample` parameter maximum value is 100 - has been for a while, but wasn't updated in Crossref docs (#44)
+* Updated docs that `facet` parameter can be a string query in addition to a boolean (#49)
+* Documented new 10,000 max value for `/works` requests - that is, for the `offset` parameter - if you need more results than that use `cursor` (see https://github.com/CrossRef/rest-api-doc/blob/master/rest_api.md#deep-paging-with-cursors) (#47)
+* Added to docs a bit about rate limiting, their current values, that they can change, and how to show them in verbose curl responses (#45)
+* Now using `https://doi.org` for `cn.content_negotation` - and function gains new parameter `url` to  specify different base URLs for content negotiation (#36)
+* Fixes to kwargs and fix docs for what can be passed to kwargs  (#41)
+* Duplicated names passed to `filter` were not working - fixed now (#48)
+* Raise proper HTTP errors when appropriate for `cn.content_negotiation` thanks @jmaupetit (#55)
+
+0.2.6 (2016-06-24)
+--------------------
+* fixed problem with `cr.works()` where DOIs passed weren't making the correct API request to Crossref (#40)
+* added support for field queries to all methods that support `/works` (<https://github.com/CrossRef/rest-api-doc/blob/master/rest_api.md#field-queries>) (#38)
+
+0.2.2 (2016-03-09)
+--------------------
+* fixed some example code that included non-working examples (#34)
+* fixed bug in `registration_agency()` method, works now! (#35)
+* removed redundant `filter_names` and `filter_details` bits in docs
+
+0.2.0 (2016-02-10)
+--------------------
+* user-agent strings now passed in every http request to Crossref, including a `X-USER-AGENT` header in case the `User-Agent` string is lost (#33)
+* added a disclaimer to docs about what is actually searched when searching the Crossref API - that is, only what is returned in the API, so no full text or abstracts are searched (#32)
+* improved http error parsing - now passes on the hopefully meaningful error messages from the Crossref API (#31)
+* more tests added (#30)
+* habanero now supports cursor for deep paging. note that cursor only works with requests to the `/works` route (#18)
+
+0.1.3 (2015-12-02)
+--------------------
+* Fix wheel file to be a universal to install on python2 and python3 (#25)
+* Added method `csl_styles` to get CSL styles for use in content negotiation (#27)
+* More documentation for content negotiation (#26)
+* Made note in docs that `sample` param ignored unless `/works` used (#24)
+* Made note in docs that funders without IDs don't show up on the `/funders` route (#23)
+
+0.1.1 (2015-11-17)
+--------------------
+* Fix readme
+
+0.1.0 (2015-11-17)
+--------------------
+* Now compatible with Python 2x and 3x
+* `agency()` method changed to `registration_agency()`
+* New method `citation_count()` - get citation counts for DOIs
+* New method `crosscite()` - get a citation for DOIs, only supports simple text format
+* New method `random_dois()` - get a random set of DOIs
+* Now importing `xml.dom` to do small amount of XML parsing
+* Changed library structure, now with module system, separated into modules for the main Crossref search API (i.e., `api.crossref.org`) including higher level methods (e.g., `registration_agency`), content negotiation, and citation counts.
+
+0.0.6 (2015-11-09)
+--------------------
+* First pypi release
diff --git a/pcr/python-habanero/PKGBUILD b/pcr/python-habanero/PKGBUILD
new file mode 100644
index 000000000..5cba17135
--- /dev/null
+++ b/pcr/python-habanero/PKGBUILD
@@ -0,0 +1,25 @@
+
+_pkgname=habanero
+pkgname=(python-$_pkgname python2-$_pkgname)
+pkgver=0.6.0
+pkgrel=1
+pkgdesc="Low Level Client for Crossref Search API"
+arch=('any')
+url="https://pypi.python.org/pypi/$_pkgname"
+license=('MIT')
+makedepends=('python-setuptools' 'python2-setuptools')
+source=("https://pypi.python.org/packages/6a/48/3396b520da48fa7d645d29ce1de6ca706fa9f4ce37a3ea5019e1f7662cac/$_pkgname-$pkgver.tar.gz"
+        "Changelog.rst")
+sha256sums=('cd83f633c2fc0bfc3d20dd3c5852c84056230d119eb3aba9b94b03e423875788'
+            '25c8c42d3c714c371db0148f91a90140a2f6e7250a5a896a27e6632b11091776')
+
+_package(){
+  depends=($1)
+  cd "$srcdir"/$_pkgname-$pkgver
+  cp "$srcdir"/Changelog.rst .
+  $1 setup.py install --root="$pkgdir"
+}
+
+for pkg in "${pkgname[@]}"; do
+  eval "package_$pkg () { _package ${pkg%%-*}; }"
+done
diff --git a/pcr/python-papis_python_rofi/PKGBUILD b/pcr/python-papis_python_rofi/PKGBUILD
new file mode 100644
index 000000000..b3bb474fd
--- /dev/null
+++ b/pcr/python-papis_python_rofi/PKGBUILD
@@ -0,0 +1,22 @@
+
+_pkgname=papis_python_rofi
+pkgname=(python-$_pkgname python2-$_pkgname)
+pkgver=1.0.2
+pkgrel=1
+pkgdesc="Create simple GUIs using the Rofi application (fork for papis)"
+arch=('any')
+url="https://pypi.python.org/pypi/${_pkgname//_/-}"
+license=('GPLv3')
+makedepends=('python-setuptools' 'python2-setuptools')
+source=("https://pypi.python.org/packages/02/e6/62e8cd2f4cc2e14a313e0490b1252f908b2ef8a841a6e0f76a83bf89806f/${_pkgname//_/-}-$pkgver.tar.gz")
+sha256sums=('3bd01a9db97b620c4249e89e37c2fe669ba405ac179ea3bffa43246c05af668e')
+
+_package(){
+  depends=($1)
+  cd "$srcdir"/${_pkgname//_/-}-$pkgver
+  $1 setup.py install --root="$pkgdir"
+}
+
+for pkg in "${pkgname[@]}"; do
+  eval "package_$pkg () { _package ${pkg%%-*}; }"
+done
diff --git a/pcr/python-pylibgen/PKGBUILD b/pcr/python-pylibgen/PKGBUILD
new file mode 100644
index 000000000..a8695e794
--- /dev/null
+++ b/pcr/python-pylibgen/PKGBUILD
@@ -0,0 +1,22 @@
+
+_pkgname=pylibgen
+pkgname=(python-$_pkgname)
+pkgver=1.3.1
+pkgrel=1
+pkgdesc="Python interface to Library Genesis."
+arch=('any')
+url="https://pypi.python.org/pypi/$_pkgname"
+license=('MIT')
+makedepends=('python-setuptools' 'python2-setuptools')
+source=(https://pypi.python.org/packages/e7/c8/1684fcb4149000877ba18046a9d5ddc59c6091793bdd0905ff4afaf9b244/$_pkgname-$pkgver.tar.gz)
+sha256sums=('303b0f279504c6b97f7619835bc9005bdadf9860c8b7a5d8204b189747c471e7')
+
+_package(){
+  depends=($1)
+  cd "$srcdir"/$_pkgname-$pkgver
+  $1 setup.py install --root="$pkgdir"
+}
+
+for pkg in "${pkgname[@]}"; do
+  eval "package_$pkg () { _package ${pkg%%-*}; }"
+done
diff --git a/pcr/python-pyparser/PKGBUILD b/pcr/python-pyparser/PKGBUILD
new file mode 100644
index 000000000..b0f6f6191
--- /dev/null
+++ b/pcr/python-pyparser/PKGBUILD
@@ -0,0 +1,27 @@
+
+_pkgname=pyparser
+pkgname=(python-$_pkgname)
+pkgver=1.0
+pkgrel=1
+pkgdesc="pyparser is a collection of classes to make it easier to parse text data in a pythonic way."
+arch=('any')
+url="https://pypi.python.org/pypi/$_pkgname"
+license=('GPLv3')
+makedepends=('python-setuptools' 'python2-setuptools')
+source=(https://pypi.python.org/packages/1a/7c/77a059dcf29b39e6c4315ce9e9c7d4959be6f13af8ee42e6d5376b599015/$_pkgname-$pkgver.tar.gz)
+sha256sums=('d1b76e2dabdd2952cadfd545229cc144afee6130bf171a031d5bf53f11b912f5')
+
+prepare() {
+  cd "$srcdir"/$_pkgname-$pkgver
+  sed -i 's/==/>=/' requirements.txt
+}
+
+_package(){
+  depends=($1 $1-parse)
+  cd "$srcdir"/$_pkgname-$pkgver
+  $1 setup.py install --root="$pkgdir"
+}
+
+for pkg in "${pkgname[@]}"; do
+  eval "package_$pkg () { _package ${pkg%%-*}; }"
+done
diff --git a/pcr/python-pypi-magic/PKGBUILD b/pcr/python-pypi-magic/PKGBUILD
new file mode 100644
index 000000000..b126ae6c1
--- /dev/null
+++ b/pcr/python-pypi-magic/PKGBUILD
@@ -0,0 +1,22 @@
+
+_pkgname=magic
+pkgname=(python-pypi-$_pkgname python2-pypi-$_pkgname)
+pkgver=0.4.15
+pkgrel=1
+pkgdesc="File type identification using libmagic"
+arch=('any')
+url='https://pypi.python.org/pypi/python-magic/'
+makedepends=('python-setuptools' 'python2-setuptools')
+license=('MIT')
+source=("https://pypi.python.org/packages/84/30/80932401906eaf787f2e9bd86dc458f1d2e75b064b4c187341f29516945c/python-magic-$pkgver.tar.gz")
+md5sums=('e384c95a47218f66c6501cd6dd45ff59')
+
+_package(){
+  depends=($1)
+  cd "$srcdir"/python-magic-$pkgver
+  $1 setup.py install --root="$pkgdir"
+}
+
+for pkg in "${pkgname[@]}"; do
+  eval "package_$pkg () { _package ${pkg%%-*}; }"
+done