# $Id: PKGBUILD 161177 2016-02-11 11:05:27Z arojas $ # Maintainer (Arch): Evgeniy Alekseev <arcanis.arch at gmail dot com> # Maintainer (Arch): Antonio Rojas <arojas@archlinux.org> # Contributor (Arch): Daniel Wallace <danielwallace at gtmanfred dot com> # Contributor (Arch): Thomas Dziedzic <gostrc at gmail dot com> # Contributor (Arch): Osman Ugus <ugus11 at yahoo dot com> # Contributor (Arch): Stefan Husmann <stefan-husmann at t-online dot de> # Special thanks to Nareto for moving the compile from the .install to the PKGBUILD # Maintainer: Omar Vega Ramos <ovruni@gnu.org.pe> # Maintainer: André Silva <emulatorman@parabola.nu> pkgname=sagemath pkgver=7.0 pkgrel=4.parabola1 pkgdesc="Free Mathematics Software, free software replacement of Magma, Maple, Mathematica, and Matlab, without nonfree nauty recommendation" arch=(i686 x86_64) url="http://www.sagemath.org" license=(GPL) depends=(ipython2 atlas-lapack ppl mpfi palp brial singular cliquer maxima-ecl gfan sympow tachyon python2-rpy2 python2-matplotlib python2-scipy python2-sympy python2-networkx python2-igraph libgap flintqs lcalc lrcalc lrs arb eclib gmp-ecm zn_poly gd python2-cvxopt pynac linbox gsl rubiks pari-galdata pari-seadata-small planarity rankwidth sage-data-combinatorial_designs sage-data-elliptic_curves sage-data-graphs sage-data-polytopes_db sage-data-conway_polynomials) optdepends=('cython2: to compile cython code' 'jmol: 3D plots' 'sage-notebook: Browser-based (flask) notebook interface' 'sagemath-doc: Documentation and inline help' 'ipython2-notebook: Jupyter notebook interface' 'mathjax: Jupyter notebook interface' 'coin-or-cbc: COIN backend for numerical computations' 'buckygen: for generating fullerene graphs' 'plantri: for generating some classes of graphs' 'benzene: for generating fusenes and benzenoids' 'modular_decomposition: modular decomposition of graphs' 'ffmpeg: to export animations to video' 'imagemagick: to show animations' 'coxeter3: Coxeter groups implementation' 'cryptominisat: SAT solver' 'gap-data: for computing Galois groups') makedepends=(cython2 boost ratpoints symmetrica fflas-ffpack python2-jinja coin-or-cbc mcqd coxeter3 cryptominisat modular_decomposition bliss-graphs tdlib) # libfes conflicts=(sage-mathematics) replaces=(sage-mathematics) provides=(sage-mathematics) source=("$pkgname-$pkgver.tar.gz::https://github.com/sagemath/sage/archive/$pkgver.tar.gz" pexpect.zip::"https://github.com/pexpect/pexpect/archive/524495960dd8898ddd30f7ba37298de51beee773.zip" ntl-no-legacy-mulmod.patch::"http://git.sagemath.org/sage.git/patch/?id=0d8435cdf" anal.h package.patch env.patch paths.patch clean.patch skip-check.patch disable-fes.patch jupyter-path.patch test-optional.patch python-2.7.11.patch contour.patch) md5sums=('34807a7cf5dd79c008abd377ba1427fa' 'a346bb2c0350c1cb17d5325235c5e38a' '8cd491caa5a574fb6348a02715151855' 'a906a180d198186a39820b0a2f9a9c63' '9ba81f717ffd4e20b8b2f2a318307488' 'e1b1d0d2e6b187309ae2b74489356b9a' 'fd8e3e07f5b7318e6a7200a3c64f5bc2' '6d9ae0978ce6a05a0da2cafdfb178a09' '5947a420a0b1483f0cbc74c76895789b' '4eb23a3c7363258bc9ba764d6e5512ba' '16b529194c6105c3364127bd8f1efa83' 'cdcabd475b80afe0534a5621e972736e' 'ef927896f2071b442b1d07d7e69f5f3a' '930cb987f63fd465a3a7123b0f5c2b85') prepare(){ cd sage-$pkgver # Parabola-specific patches # assume all optional packages are installed patch -p0 -i ../package.patch # find L.h header sed -e 's|libLfunction|Lfunction|' -i src/sage/libs/lcalc/lcalc_sage.h # don't try to link against libpng 1.2 sed -e 's|png12|png|' -i src/module_list.py # set env variables patch -p0 -i ../env.patch # fix paths in python imports patch -p0 -i ../paths.patch # don't try to remove installed files patch -p0 -i ../clean.patch # skip checking build status patch -p0 -i ../skip-check.patch # supress warning about GAP install dir sed -e "s|gapdir = os.path.join(SAGE_LOCAL, 'gap', 'latest')|gapdir = '/usr/lib/gap'|" -i src/sage/libs/gap/util.pyx # fix Cremona database detection sed -e "s|is_package_installed('database_cremona_ellcurve')|os.path.exists('/usr/share/sage/cremona/cremona.db')|" \ -i src/sage/databases/cremona.py # find bliss headers sed -e 's|graph.hh|bliss/graph.hh|' -i src/sage/graphs/bliss.pyx # don't list optional packages when running tests patch -p0 -i ../test-optional.patch # set jupyter path patch -p0 -i ../jupyter-path.patch # fix timeit with Python 2.7.11 patch -p0 -i ../python-2.7.11.patch # fix contour plots with matplotlib 1.5.1 patch -p0 -i ../contour.patch # Upstream patches # fix build against libfes 0.2 http://trac.sagemath.org/ticket/15209 # patch -p0 -i ../fes02.patch # disable fes module, fails to compile patch -p0 -i ../disable-fes.patch # port away from deprecated NTL API http://trac.sagemath.org/19874 patch -p1 -i ../ntl-no-legacy-mulmod.patch # use python2 sed -e 's|#!/usr/bin/env python|#!/usr/bin/env python2|' -e 's|exec python|exec python2|' -i src/bin/* sed -e 's|cython {OPT}|cython2 {OPT}|' -e 's|python setup.py|python2 setup.py|' -i src/sage/misc/cython.py sed -e 's|exec ipython|exec ipython2|' -e 's|cygdb|cygdb2|' -i src/bin/sage sed -e "s|'cython'|'cython2'|" -i src/bin/sage-cython sed -e 's|python -c|python2 -c|' -i src/Makefile # copy required private PARI header mkdir -p src/pari cp "$srcdir"/anal.h src/pari/anal.h # remove developer interface rm -r src/sage/dev } build() { cd sage-$pkgver/src export SAGE_LOCAL="/usr" export SAGE_SRC="$PWD" export CC=gcc make sage/libs/pari/auto_gen.pxi make sage/ext/interpreters/__init__.py python2 setup.py build cd "$srcdir"/pexpect-* python2 setup.py build } package() { cd sage-$pkgver/src export SAGE_ROOT="/usr" export SAGE_LOCAL="$SAGE_ROOT" export SAGE_SRC="$PWD" export CC=gcc export JUPYTER_PATH="$pkgdir"/usr/share/jupyter python2 setup.py install --root="$pkgdir" --optimize=1 --skip-build mkdir -p "$pkgdir"/usr/bin cp bin/sage "$pkgdir"/usr/bin for _i in arch-env banner cachegrind callgrind cleaner coverage coverageall CSI CSI-helper.py cython env eval grep grepdoc inline-fortran ipython \ massif maxima.lisp native-execute notebook num-threads.py omega open preparse python rst2sws rst2txt run run-cython runtests startuptime.py \ sws2rst valgrind version.sh do cp bin/sage-$_i "$pkgdir"/usr/bin done cp bin/math-readline "$pkgdir"/usr/bin mkdir -p "$pkgdir"/usr/share/sage cp -r ext "$pkgdir"/usr/share/sage # Create SAGE_SRC, needed for the notebook mkdir "$pkgdir"/usr/share/sage/source # install pexpect cd "$srcdir"/pexpect-* python2 setup.py install --root="$pkgdir" --optimize=1 mkdir -p "$pkgdir"/usr/lib/sage/site-packages/ mv "$pkgdir"/usr/lib/python2.7/site-packages/pexpect "$pkgdir"/usr/lib/sage/site-packages/ }