From 1a4f56fea2827b1688083ee95ae9748e621e248a Mon Sep 17 00:00:00 2001
From: Andreas Grapentin <andreas@grapentin.org>
Date: Thu, 1 Feb 2018 16:01:45 +0100
Subject: pcr/beast2: updated to 2.4.7

---
 pcr/beast2/PKGBUILD | 16 +++++++++++-----
 1 file changed, 11 insertions(+), 5 deletions(-)

(limited to 'pcr')

diff --git a/pcr/beast2/PKGBUILD b/pcr/beast2/PKGBUILD
index 52720625c..80c8e05d8 100644
--- a/pcr/beast2/PKGBUILD
+++ b/pcr/beast2/PKGBUILD
@@ -1,15 +1,19 @@
+# Maintainer (AUR): Christian Krause ("wookietreiber") <christian.krause@mailbox.org>
 # Maintainer : Aurelien Desbrieres <aurelien@hackers.camp>
-# Maintainer: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com>
+
+# parabola changes and rationale:
+#  no changes.
 
 pkgname=beast2
-pkgver=2.1.3
+pkgver=2.4.7
 pkgrel=1
 pkgdesc='Bayesian Evolutionary Analysis by Sampling Trees'
 arch=(any)
 url="http://www.beast2.org/"
 license=('GPL2')
-depends=('bash' 'java-runtime')
-source=(https://github.com/CompEvol/beast2/releases/download/v$pkgver/BEAST.v$pkgver.tgz)
+depends=('bash' 'java-runtime>=8')
+optdepends=('beagle-lib')
+source=("https://github.com/CompEvol/beast2/releases/download/v$pkgver/BEAST.v$pkgver.Linux.tgz")
 
 package() {
   cd $srcdir
@@ -17,7 +21,7 @@ package() {
   mkdir -p $pkgdir/usr/bin
   mkdir -p $pkgdir/usr/share
 
-  cp -r BEAST $pkgdir/usr/share/beast2
+  cp -r beast $pkgdir/usr/share/beast2
 
   cd $pkgdir/usr/bin
 
@@ -25,3 +29,5 @@ package() {
     ln -s $i
   done
 }
+
+md5sums=('71134fd087819803c0d8a5a390d3ab0e')
-- 
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