From 4b9a24484b3f55b017b6cdc30ff372dc310be5f7 Mon Sep 17 00:00:00 2001 From: André Fabian Silva Delgado Date: Wed, 29 Jul 2015 18:54:06 -0300 Subject: sagemath-6.8-1.parabola1: updating version * disable fes module, doesn't compile * replace "open" to "free" term to pkgdesc -> https://www.gnu.org/philosophy/words-to-avoid.html.en#Open * replace "alternative" to "replacement" term to pkgdesc -> https://www.gnu.org/philosophy/words-to-avoid.html.en#Alternative --- libre/sagemath/PKGBUILD | 87 +++++++++++++++++++++---------------------------- 1 file changed, 38 insertions(+), 49 deletions(-) (limited to 'libre/sagemath/PKGBUILD') diff --git a/libre/sagemath/PKGBUILD b/libre/sagemath/PKGBUILD index 485f89544..e121efc5f 100644 --- a/libre/sagemath/PKGBUILD +++ b/libre/sagemath/PKGBUILD @@ -7,72 +7,68 @@ # Contributor (Arch): Stefan Husmann # Special thanks to Nareto for moving the compile from the .install to the PKGBUILD # Maintainer: Omar Vega Ramos +# Maintainer: André Silva pkgname=sagemath -pkgver=6.7 -pkgrel=3.parabola1 -pkgdesc="Open Source Mathematics Software, free alternative to Magma, Maple, Mathematica, and Matlab, without nonfree nauty recommendation" -arch=('i686' 'x86_64') +pkgver=6.8 +pkgrel=1.parabola1 +pkgdesc="Free Mathematics Software, free software replacement of Magma, Maple, Mathematica, and Matlab, without nonfree nauty recommendation" +arch=(i686 x86_64) url="http://www.sagemath.org" -license=('GPL') -depends=('ipython2' 'ppl' 'glpk' 'mpfi' 'palp' 'polybori' 'singular' 'libcliquer' 'maxima-ecl' 'gfan' 'sympow' 'tachyon' 'python2-rpy2' - 'python2-matplotlib' 'python2-scipy' 'python2-sympy' 'python2-networkx' 'libgap' 'gap' 'flintqs' 'lcalc' 'lrcalc' - 'eclib' 'gmp-ecm' 'zn_poly' 'gd' 'python2-cvxopt' 'pynac' 'linbox' 'gsl' 'rubiks' 'pari-galdata' 'pari-seadata-small' - 'sage-data-combinatorial_designs' 'sage-data-elliptic_curves' 'sage-data-graphs' 'sage-data-polytopes_db' 'sage-data-conway_polynomials') +license=(GPL) +depends=(ipython2 ppl glpk mpfi palp polybori singular libcliquer maxima-ecl gfan sympow tachyon python2-rpy2 + python2-matplotlib python2-scipy python2-sympy python2-networkx libgap gap flintqs lcalc lrcalc + eclib gmp-ecm zn_poly gd python2-cvxopt pynac linbox gsl rubiks pari-galdata pari-seadata-small planarity rankwidth + sage-data-combinatorial_designs sage-data-elliptic_curves sage-data-graphs sage-data-polytopes_db sage-data-conway_polynomials) optdepends=('cython2: to compile cython code' 'jmol: 3D plots' 'sage-notebook: Browser-based (flask) notebook interface' - 'sagemath-doc: Documentation and inline help' 'sagemath-src: source files needed to build cython code' - 'ipython2-notebook: IPython notebook interface' 'mathjax: IPython notebook interface' + 'sagemath-doc: Documentation and inline help' 'ipython2-notebook: IPython notebook interface' 'mathjax: IPython notebook interface' 'coin-or-cbc: COIN backend for numerical computations' 'buckygen: for generating fullerene graphs' 'plantri: for generating some classes of graphs' 'benzene: for generating fusenes and benzenoids' - 'libfes: exhaustive search of solutions for boolean polynomial systems' 'modular_decomposition: modular decomposition of graphs' + 'modular_decomposition: modular decomposition of graphs' 'lrs: Algorithms for linear reverse search used in game theory and for computing volume of polytopes' 'imagemagick: to show animations' 'coxeter3: Coxeter groups implementation' 'cryptominisat: SAT solver' 'arb: floating-point ball arithmetic') -makedepends=('cython2-devel' 'boost' 'scons' 'ratpoints' 'symmetrica' 'fflas-ffpack' 'python2-jinja' 'coin-or-cbc' - 'mcqd' 'libfes' 'coxeter3' 'cryptominisat' 'arb' 'modular_decomposition' 'bliss-graphs') -conflicts=('sage-mathematics') -replaces=('sage-mathematics') -provides=('sage-mathematics') +makedepends=(cython2-devel boost ratpoints symmetrica fflas-ffpack python2-jinja coin-or-cbc + mcqd coxeter3 cryptominisat arb modular_decomposition bliss-graphs) # libfes +conflicts=(sage-mathematics) +replaces=(sage-mathematics) +provides=(sage-mathematics) source=("$pkgname-$pkgver.tar.gz::https://github.com/sagemath/sage/archive/$pkgver.tar.gz" # "http://www.sagemath.org/packages/upstream/pexpect/pexpect-2.0.tar.bz2" "http://mirrors.mit.edu/sage/spkg/upstream/pexpect/pexpect-2.0.tar.bz2" -'anal.h' 'package.patch' 'c_lib.patch' 'env.patch' 'paths.patch' 'clean.patch' 'skip-check.patch' -'pexpect-env.patch' 'pexpect-del.patch' 'fes02.patch' 'ntl9.patch') -md5sums=('df744e882a4b25b42dd8347e202cd497' +'anal.h' 'package.patch' 'env.patch' 'paths.patch' 'clean.patch' 'skip-check.patch' +'pexpect-env.patch' 'pexpect-del.patch' 'disable-fes.patch') +md5sums=('943780ef4460e38f28fefe95e3138981' 'd9a3e113ed147dcee8f89962a8dccd43' 'a906a180d198186a39820b0a2f9a9c63' - '0eb5ac1537aac93bd67a2925c0cfd84d' - 'c452558d3496b07be472dad57195d45d' - '3fc9a5bb250896533365c30c2b926e3c' - '020bdb34b6fc0f2c9f46341bdb79937a' - '46c212a3a6713b0f78c370c7186d0982' + 'f72e544032b1a3f952b7ddafc3a49d63' + '843a6cc3b17a1850604593813321418e' + 'fd8e3e07f5b7318e6a7200a3c64f5bc2' + '23e972753be1e5d0f761a7f82a95cebf' '5947a420a0b1483f0cbc74c76895789b' 'a83a3b1bc7fcb7cbf752a83a8311fc42' 'f333939ea6c41377b66407c81016cee4' - '506944613082ba7f5b34360939ca90eb' - '308abbb1a49db9b8f0e088aff69567ff') + '4eb23a3c7363258bc9ba764d6e5512ba') prepare(){ cd sage-$pkgver -# Arch-specific patches +# Parabola-specific patches # assume all optional packages are installed - patch -p0 -i "$srcdir"/package.patch -# don't assume Sage is already available (Fedora) - patch -p0 -i "$srcdir"/c_lib.patch + patch -p0 -i ../package.patch # find L.h header - sed -e 's|libLfunction|Lfunction|' -i src/module_list.py + sed -e 's|libLfunction|Lfunction|' -i src/sage/libs/lcalc/lcalc_sage.h # don't try to link against libpng 1.2 sed -e 's|png12|png|' -i src/module_list.py # set env variables - patch -p0 -i "$srcdir"/env.patch + patch -p0 -i ../env.patch # fix paths in python imports - patch -p0 -i "$srcdir"/paths.patch + patch -p0 -i ../paths.patch # fix cython linking sed -e "s| atlas(),||" -i src/sage/misc/cython.py # don't try to remove installed files - patch -p0 -i "$srcdir"/clean.patch + patch -p0 -i ../clean.patch # skip checking build status - patch -p0 -i "$srcdir"/skip-check.patch + patch -p0 -i ../skip-check.patch # supress warning about GAP install dir sed -e "s|gapdir = os.path.join(SAGE_LOCAL, 'gap', 'latest')|gapdir = '/usr/lib/gap'|" -i src/sage/libs/gap/util.pyx # fix Cremona database detection @@ -82,14 +78,12 @@ prepare(){ sed -e "s|os.path.join(SAGE_ROOT, 'sage')|'/usr/bin/sage'|" -i src/sage/repl/ipython_kernel/install.py # find bliss headers sed -e 's|graph.hh|bliss/graph.hh|' -i src/sage/graphs/bliss.pyx -# Rename class to fix conflicts with NTL - sed -e 's|WrappedPtr|SageWrappedPtr|' -i src/sage/libs/polybori/decl.pxd -i src/sage/libs/polybori/pb_wrap.h # Upstream patches # fix build against libfes 0.2 http://trac.sagemath.org/ticket/15209 - patch -p0 -i "$srcdir"/fes02.patch -# fix build aginst NTL 9 (Fedora) - patch -p0 -i "$srcdir"/ntl9.patch +# patch -p0 -i "$srcdir"/fes02.patch +# disable fes module, fails to compile + patch -p0 -i ../disable-fes.patch # use python2 sed -e 's|#!/usr/bin/env python|#!/usr/bin/env python2|' -e 's|exec python|exec python2|' -i src/bin/* @@ -107,9 +101,9 @@ prepare(){ cd "$srcdir"/pexpect-2.0 # fix env in pexpect - patch -p1 -i "$srcdir"/pexpect-env.patch + patch -p1 -i ../pexpect-env.patch # hide exceptions in pexpect - patch -p1 -i "$srcdir"/pexpect-del.patch + patch -p1 -i ../pexpect-del.patch } @@ -120,10 +114,6 @@ build() { export SAGE_SRC="$PWD" export CC=gcc - pushd c_lib - CXX=g++ UNAME=Linux SAGE64=auto scons - popd - make sage/libs/pari/auto_gen.pxi make sage/ext/interpreters/__init__.py @@ -144,8 +134,7 @@ package() { python2 setup.py install --root="$pkgdir" --optimize=1 - mkdir -p "$pkgdir"/usr/{bin,lib} - cp c_lib/libcsage.so "$pkgdir"/usr/lib + mkdir -p "$pkgdir"/usr/bin cp bin/sage "$pkgdir"/usr/bin for _i in arch-env banner cachegrind callgrind cleaner coverage coverageall CSI CSI-helper.py cython env eval grep grepdoc inline-fortran ipython \ massif maxima.lisp native-execute notebook num-threads.py omega open preparse python rst2sws rst2txt run run-cython runtests startuptime.py \ -- cgit v1.2.3